Publications

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Journal Article
Simpson R, Devenyi GA, Jezzard P, T Hennessy J, Near J.  2017.  Advanced processing and simulation of MRS data using the FID appliance (FID-A)-An open source, MATLAB-based toolkit.. Magn Reson Med. 77(1):23-33.
Kang MSu, Aliaga AAliaga, Shin M, Mathotaarachchi S, Benedet AL, Pascoal TA, Therriault J, Chamoun M, Savard M, Devenyi GA et al..  2020.  Amyloid-beta modulates the association between neurofilament light chain and brain atrophy in Alzheimer's disease.. Mol Psychiatry.
Gorgolewski KJ, Alfaro-Almagro F, Auer T, Bellec P, Capotă M, M Chakravarty M, Churchill NW, Cohen ALi, R Craddock C, Devenyi GA et al..  2017.  BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.. PLoS Comput Biol. 13(3):e1005209.
Winterburn JL, Voineskos AN, Devenyi GA, Plitman E, de la Fuente-Sandoval C, Bhagwat N, Graff-Guerrero A, Knight J, M Chakravarty M.  2017.  Can we accurately classify schizophrenia patients from healthy controls using magnetic resonance imaging and machine learning? A multi-method and multi-dataset study. Schizophr Res.
Laidi C, Boisgontier J, M Chakravarty M, Hotier S, d'Albis M-A, Mangin J-FOis, Devenyi GA, Delorme R, Bolognani F, Czech C et al..  2017.  Cerebellar anatomical alterations and attention to eyes in autism.. Sci Rep. 7(1):12008.
Rollins CPE, Gallino D, Kong V, Ayranci G, Devenyi GA, Germann J, M Chakravarty M.  2018.  Contributions of a high-fat diet to Alzheimer's disease-related decline: A longitudinal behavioural and structural neuroimaging study in mouse models.. Neuroimage Clin.
Nasseef MTaufiq, Devenyi GA, Mechling AE, Harsan L-A, M Chakravarty M, Kieffer BL, Darcq E.  2018.  Deformation-based Morphometry MRI Reveals Brain Structural Modifications in Living Mu Opioid Receptor Knockout Mice.. Front Psychiatry. 9:643.
Chapleau M, Bedetti C, Devenyi GA, Sheldon S, Rosen HJ, Miller BL, Gorno-Tempini MLuisa, Chakravarty MM, Brambati SM.  2020.  Deformation-based shape analysis of the hippocampus in the semantic variant of primary progressive aphasia and Alzheimer's disease.. Neuroimage Clin. 27:102305.
Kong V, Devenyi GA, Gallino D, Ayranci G, Germann J, Rollins C, M Chakravarty M.  2018.  Early-in-life neuroanatomical and behavioural trajectories in a triple transgenic model of Alzheimer's disease.. Brain Struct Funct.
Makowski C, Béland S, Kostopoulos P, Bhagwat N, Devenyi GA, Malla AK, Joober R, Lepage M, M Chakravarty M.  2018.  Evaluating accuracy of striatal, pallidal, and thalamic segmentation methods: Comparing automated approaches to manual delineation.. Neuroimage. 170:182-198.
Boutet A, Ranjan M, Zhong J, Germann J, Xu D, Schwartz ML, Lipsman N, Hynynen K, Devenyi GA, M Chakravarty M et al..  2018.  Focused ultrasound thalamotomy location determines clinical benefits in patients with essential tremor.. Brain. 141(12):3405-3414.
Germann J, Gouveia FVenetucci, Martinez RCR, Zanetti MVinicius, Duran FLuís de S, Chaim-Avancini TM, Serpa MH, M Chakravarty M, Devenyi GA.  2020.  Fully Automated Habenula Segmentation Provides Robust and Reliable Volume Estimation Across Large Magnetic Resonance Imaging Datasets, Suggesting Intriguing Developmental Trajectories in Psychiatric Disease.. Biol Psychiatry Cogn Neurosci Neuroimaging. 5(9):923-929.
Patel S, Park MTae M, Devenyi GA, Patel R, Masellis M, Knight J, M Chakravarty M.  2017.  Heritability of hippocampal subfield volumes using a twin and non-twin siblings design.. Hum Brain Mapp. 38(9):4337-4352.
Talpalaru A, Bhagwat N, Devenyi GA, Lepage M, M Chakravarty M.  2019.  Identifying schizophrenia subgroups using clustering and supervised learning.. Schizophr Res. 214:51-59.
Patel R, Steele CJ, Chen AGX, Patel S, Devenyi GA, Germann J, Tardif CL, M Chakravarty M.  2020.  Investigating microstructural variation in the human hippocampus using non-negative matrix factorization.. Neuroimage. 207:116348.
Bedford SA, Park MTae M, Devenyi GA, Tullo S, Germann J, Patel R, Anagnostou E, Baron-Cohen S, Bullmore ET, Chura LR et al..  2019.  Large-scale analyses of the relationship between sex, age and intelligence quotient heterogeneity and cortical morphometry in autism spectrum disorder.. Mol Psychiatry.
Kirschner M, Shafiei G, Markello RD, Makowski C, Talpalaru A, Hodzic-Santor B, Devenyi GA, Paquola C, Bernhardt BC, Lepage M et al..  2020.  Latent Clinical-Anatomical Dimensions of Schizophrenia.. Schizophr Bull.
Gallino D, Devenyi GA, Germann J, Guma E, Anastassiadis C, M Chakravarty M.  2019.  Longitudinal assessment of the neuroanatomical consequences of deep brain stimulation: Application of fornical DBS in an Alzheimer's mouse model.. Brain Res. 1715:213-223.
Amaral RSC, Park MTae M, Devenyi GA, Lynn V, Pipitone J, Winterburn J, Chavez S, Schira M, Lobaugh NJ, Voineskos AN et al..  2016.  Manual segmentation of the fornix, fimbria, and alveus on high-resolution 3T MRI: Application via fully-automated mapping of the human memory circuit white and grey matter in healthy and pathological aging.. Neuroimage.
Tullo S, Patel R, Devenyi GA, Salaciak A, Bedford SA, Farzin S, Wlodarski N, Tardif CL, Breitner JCS, M Chakravarty M.  2019.  MR-based age-related effects on the striatum, globus pallidus, and thalamus in healthy individuals across the adult lifespan.. Hum Brain Mapp.
Goerzen D, Fowler C, Devenyi GA, Germann J, Madularu D, M Chakravarty M, Near J.  2020.  An MRI-Derived Neuroanatomical Atlas of the Fischer 344 Rat Brain.. Sci Rep. 10(1):6952.
Shaw P, Ishii-Takahashi A, Park MTae, Devenyi GA, Zibman C, Kasparek S, Sudre G, Mangalmurti A, Hoogman M, Tiemeier H et al..  2018.  A multicohort, longitudinal study of cerebellar development in attention deficit hyperactivity disorder.. J Child Psychol Psychiatry.
Guma E, Devenyi GA, Malla A, Shah JL, M Chakravarty M, Pruessner M.  2017.  Neuroanatomical and Symptomatic Sex Differences in Individuals at Clinical High Risk for Psychosis.. Front Psychiatry. 8:291.
Stojanovski S, Felsky D, Viviano JD, Shahab S, Bangali R, Burton CL, Devenyi GA, O'Donnell LJ, Szatmari P, M Chakravarty M et al..  2018.  Polygenic Risk and Neural Substrates of Attention-Deficit/Hyperactivity Disorder Symptoms in Youths With a History of Mild Traumatic Brain Injury.. Biol Psychiatry.
Guadagno A, Kang MSu, Devenyi GA, Mathieu AP, Rosa-Neto P, M Chakravarty M, C-D Walker.  2018.  Reduced resting-state functional connectivity of the basolateral amygdala to the medial prefrontal cortex in preweaning rats exposed to chronic early-life stress.. Brain Struct Funct.

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