Publications

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Journal Article
Simpson R, Devenyi GA, Jezzard P, T Hennessy J, Near J.  2017.  Advanced processing and simulation of MRS data using the FID appliance (FID-A)-An open source, MATLAB-based toolkit.. Magn Reson Med. 77(1):23-33.
Kang MSu, Aliaga AAliaga, Shin M, Mathotaarachchi S, Benedet AL, Pascoal TA, Therriault J, Chamoun M, Savard M, Devenyi GA et al..  2020.  Amyloid-beta modulates the association between neurofilament light chain and brain atrophy in Alzheimer's disease.. Mol Psychiatry.
Gorgolewski KJ, Alfaro-Almagro F, Auer T, Bellec P, Capotă M, Chakravarty MM, Churchill NW, Cohen ALi, R Craddock C, Devenyi GA et al..  2017.  BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.. PLoS Comput Biol. 13(3):e1005209.
Gouveia FVenetucci, Germann J, Devenyi GA, Fonoff ET, Morais RMCB, Brentani H, Chakravarty MM, Martinez RCR.  2021.  Bilateral Amygdala Radio-Frequency Ablation for Refractory Aggressive Behavior Alters Local Cortical Thickness to a Pattern Found in Non-refractory Patients.. Front Hum Neurosci. 15:653631.
Winterburn JL, Voineskos AN, Devenyi GA, Plitman E, de la Fuente-Sandoval C, Bhagwat N, Graff-Guerrero A, Knight J, Chakravarty MM.  2017.  Can we accurately classify schizophrenia patients from healthy controls using magnetic resonance imaging and machine learning? A multi-method and multi-dataset study. Schizophr Res.
Laidi C, Boisgontier J, Chakravarty MM, Hotier S, d'Albis M-A, Mangin J-FOis, Devenyi GA, Delorme R, Bolognani F, Czech C et al..  2017.  Cerebellar anatomical alterations and attention to eyes in autism.. Sci Rep. 7(1):12008.
Rollins CPE, Gallino D, Kong V, Ayranci G, Devenyi GA, Germann J, Chakravarty MM.  2018.  Contributions of a high-fat diet to Alzheimer's disease-related decline: A longitudinal behavioural and structural neuroimaging study in mouse models.. Neuroimage Clin.
Fotopoulos NH, Devenyi GA, Guay S, Sengupta SM, Chakravarty MM, Grizenko N, Karama S, Joober R.  2021.  Cumulative exposure to ADHD medication is inversely related to hippocampus subregional volume in children.. Neuroimage Clin. 31:102695.
Nasseef MTaufiq, Devenyi GA, Mechling AE, Harsan L-A, Chakravarty MM, Kieffer BL, Darcq E.  2018.  Deformation-based Morphometry MRI Reveals Brain Structural Modifications in Living Mu Opioid Receptor Knockout Mice.. Front Psychiatry. 9:643.
Chapleau M, Bedetti C, Devenyi GA, Sheldon S, Rosen HJ, Miller BL, Gorno-Tempini MLuisa, Chakravarty MM, Brambati SM.  2020.  Deformation-based shape analysis of the hippocampus in the semantic variant of primary progressive aphasia and Alzheimer's disease.. Neuroimage Clin. 27:102305.
Guimond S, Gu F, Shannon H, Kelly S, Mike L, Devenyi GA, Chakravarty MM, Sweeney JA, Pearlson G, Clementz BA et al..  2021.  A Diagnosis and Biotype Comparison Across the Psychosis Spectrum: Investigating Volume and Shape Amygdala-Hippocampal Differences from the B-SNIP Study.. Schizophr Bull. 47(6):1706-1717.
Guma E, Bordignon Pdo Couto, Devenyi GA, Gallino D, Anastassiadis C, Cvetkovska V, Barry AD, Snook E, Germann J, Greenwood CMT et al..  2021.  Early or Late Gestational Exposure to Maternal Immune Activation Alters Neurodevelopmental Trajectories in Mice: An Integrated Neuroimaging, Behavioral, and Transcriptional Study.. Biol Psychiatry. 90(5):328-341.
Kong V, Devenyi GA, Gallino D, Ayranci G, Germann J, Rollins C, Chakravarty MM.  2018.  Early-in-life neuroanatomical and behavioural trajectories in a triple transgenic model of Alzheimer's disease.. Brain Struct Funct.
Makowski C, Béland S, Kostopoulos P, Bhagwat N, Devenyi GA, Malla A, Joober R, Lepage M, Chakravarty MM.  2018.  Evaluating accuracy of striatal, pallidal, and thalamic segmentation methods: Comparing automated approaches to manual delineation.. Neuroimage. 170:182-198.
Olafson E, Bedford SA, Devenyi GA, Patel R, Tullo S, Park MTae M, Parent O, Anagnostou E, Baron-Cohen S, Bullmore ET et al..  2021.  Examining the Boundary Sharpness Coefficient as an Index of Cortical Microstructure in Autism Spectrum Disorder.. Cereb Cortex. 31(7):3338-3352.
Boutet A, Ranjan M, Zhong J, Germann J, Xu D, Schwartz ML, Lipsman N, Hynynen K, Devenyi GA, Chakravarty MM et al..  2018.  Focused ultrasound thalamotomy location determines clinical benefits in patients with essential tremor.. Brain. 141(12):3405-3414.
Germann J, Gouveia FVenetucci, Martinez RCR, Zanetti MVinicius, Duran FLuís de S, Chaim-Avancini TM, Serpa MH, Chakravarty MM, Devenyi GA.  2020.  Fully Automated Habenula Segmentation Provides Robust and Reliable Volume Estimation Across Large Magnetic Resonance Imaging Datasets, Suggesting Intriguing Developmental Trajectories in Psychiatric Disease.. Biol Psychiatry Cogn Neurosci Neuroimaging. 5(9):923-929.
Patel S, Park MTae M, Devenyi GA, Patel R, Masellis M, Knight J, Chakravarty MM.  2017.  Heritability of hippocampal subfield volumes using a twin and non-twin siblings design.. Hum Brain Mapp. 38(9):4337-4352.
Bussy A, Patel R, Plitman E, Tullo S, Salaciak A, Bedford SA, Farzin S, Béland M-L, Valiquette V, Kazazian C et al..  2021.  Hippocampal shape across the healthy lifespan and its relationship with cognition.. Neurobiol Aging. 106:153-168.
Bussy A, Plitman E, Patel R, Tullo S, Salaciak A, Bedford SA, Farzin S, Béland M-L, Valiquette V, Kazazian C et al..  2021.  Hippocampal subfield volumes across the healthy lifespan and the effects of MR sequence on estimates.. Neuroimage. 233:117931.
Talpalaru A, Bhagwat N, Devenyi GA, Lepage M, Chakravarty MM.  2019.  Identifying schizophrenia subgroups using clustering and supervised learning.. Schizophr Res. 214:51-59.
Plitman E, Bussy A, Valiquette V, Salaciak A, Patel R, Cupo L, Béland M-L, Tullo S, Tardif CLucas, Maria Rajah N et al..  2021.  The impact of the Siemens Tim Trio to Prisma upgrade and the addition of volumetric navigators on cortical thickness, structure volume, and H-MRS indices: An MRI reliability study with implications for longitudinal study designs.. Neuroimage. 238:118172.
Patel R, Steele CJ, Chen AGX, Patel S, Devenyi GA, Germann J, Tardif CL, Chakravarty MM.  2020.  Investigating microstructural variation in the human hippocampus using non-negative matrix factorization.. Neuroimage. 207:116348.
Germann J, Gouveia FVenetucci, Brentani H, Bedford SA, Tullo S, Chakravarty MM, Devenyi GA.  2021.  Involvement of the habenula in the pathophysiology of autism spectrum disorder.. Sci Rep. 11(1):21168.
Bedford SA, Park MTae M, Devenyi GA, Tullo S, Germann J, Patel R, Anagnostou E, Baron-Cohen S, Bullmore ET, Chura LR et al..  2019.  Large-scale analyses of the relationship between sex, age and intelligence quotient heterogeneity and cortical morphometry in autism spectrum disorder.. Mol Psychiatry.

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